{ "_id": "6a198072acfb0bcc41df8983", "Package": "ciftier", "Type": "Package", "Title": "Read and Write CIFTI-2 Neuroimaging Files", "Version": "0.1.0", "Authors@R": "c(\nperson(c(\"Bradley\", \"R\"), \"Buchsbaum\", role = c(\"aut\", \"cre\", \"cph\"),\nemail = \"brad.buchsbaum@gmail.com\"))", "Description": "Pure R implementation of CIFTI-2 format I/O for\ngrayordinate neuroimaging data. Reads and writes dense\ntimeseries (.dtseries.nii), dense scalars (.dscalar.nii), and\ndense labels (.dlabel.nii) files without requiring external\ntools such as Connectome Workbench. Provides S4 classes\nmirroring the CIFTI-2 XML schema, user-friendly axis\nabstractions, and optional integration with 'neuroim2' and\n'neurosurf' for spatially-aware brain imaging objects.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "Collate": "'constants.R' 'all_generic.R' 'all_class.R' 'utils.R'\n'cifti_xml.R' 'cifti_axis.R' 'cifti_axis_methods.R'\n'cifti_image.R' 'cifti_io.R' 'cifti_intent.R' 'integration.R'\n'zzz.R'", "RoxygenNote": "7.3.3", "Config/testthat/edition": "3", "URL": "https://github.com/bbuchsbaum/ciftier", "BugReports": "https://github.com/bbuchsbaum/ciftier/issues", "Config/pak/sysreqs": "libxml2-dev", "Repository": "https://bbuchsbaum.r-universe.dev", "Date/Publication": "2026-03-30 02:55:20 UTC", "RemoteUrl": "https://github.com/bbuchsbaum/ciftier", "RemoteRef": "HEAD", "RemoteSha": "dc2f46b92576f92adceca141f450f958d87c95f1", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-29 11:36:15 UTC", "User": "root" }, "Author": "Bradley R Buchsbaum 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"CIFTI_INDEX_TYPES" ] }, { "page": "cifti_intent", "title": "Get the NIfTI Intent Code", "topics": [ "cifti_intent" ] }, { "page": "CIFTI_INTENTS", "title": "CIFTI-2 NIfTI Intent Codes", "topics": [ "CIFTI_INTENTS" ] }, { "page": "CIFTI_MODEL_TYPES", "title": "CIFTI-2 Brain Model Types", "topics": [ "CIFTI_MODEL_TYPES" ] }, { "page": "CIFTI_SERIES_UNITS", "title": "CIFTI-2 Series Unit Types", "topics": [ "CIFTI_SERIES_UNITS" ] }, { "page": "CIFTI_STRUCTURES", "title": "CIFTI-2 Brain Structure Names", "topics": [ "CIFTI_STRUCTURES" ] }, { "page": "CiftiAxis-class", "title": "CiftiAxis Virtual Base Class", "topics": [ "CiftiAxis-class" ] }, { "page": "CiftiBrainModel-class", "title": "CiftiBrainModel Class", "topics": [ "CiftiBrainModel-class" ] }, { "page": "CiftiHeader-class", "title": "CiftiHeader Class", "topics": [ "CiftiHeader-class" ] }, { "page": "CiftiImage", "title": "Create a CiftiImage", "topics": [ "CiftiImage" ] }, { "page": "CiftiImage-class", "title": "CiftiImage Class", "topics": [ "brain_models,CiftiImage-method", "CiftiImage-class", "cifti_data,CiftiImage-method", "cifti_header,CiftiImage-method", "cifti_intent,CiftiImage-method", "col_axis,CiftiImage-method", "dim,CiftiImage-method", "extract_structure,CiftiImage,character-method", "named_maps,CiftiImage-method", "row_axis,CiftiImage-method", "show,CiftiImage-method", "volume_info,CiftiImage-method", "[,CiftiImage,ANY,ANY-method" ] }, { "page": "CiftiLabel-class", "title": "CiftiLabel Class", "topics": [ "CiftiLabel-class" ] }, { "page": "CiftiLabelTable-class", "title": "CiftiLabelTable Class", "topics": [ "CiftiLabelTable-class" ] }, { "page": "CiftiMatrix-class", "title": "CiftiMatrix Class", "topics": [ "CiftiMatrix-class" ] }, { "page": "CiftiMatrixIndicesMap-class", "title": "CiftiMatrixIndicesMap Class", "topics": [ "CiftiMatrixIndicesMap-class" ] }, { "page": "CiftiNamedMap-class", "title": "CiftiNamedMap Class", "topics": [ "CiftiNamedMap-class" ] }, { "page": "CiftiParcel-class", "title": "CiftiParcel Class", "topics": [ "CiftiParcel-class" ] }, { "page": "CiftiSurface-class", "title": "CiftiSurface Class", "topics": [ "CiftiSurface-class" ] }, { "page": "CiftiVolume-class", "title": "CiftiVolume Class", "topics": [ "CiftiVolume-class" ] }, { "page": "col_axis", "title": "Get the Column Axis of a CIFTI Object", "topics": [ "col_axis" ] }, { "page": "dconn", "title": "Create a Dense Connectivity CIFTI Image", "topics": [ "dconn" ] }, { "page": "dlabel", "title": "Create a Dense Label CIFTI Image", "topics": [ "dlabel" ] }, { "page": "dpconn", "title": "Create a Dense-to-Parcel Connectivity CIFTI Image", "topics": [ "dpconn" ] }, { "page": "dscalar", "title": "Create a Dense Scalar CIFTI Image", "topics": [ "dscalar" ] }, { "page": "dtseries", "title": "Create a Dense Timeseries CIFTI Image", "topics": [ "dtseries" ] }, { "page": "extract_structure", "title": "Extract Data for a Single Brain Structure", "topics": [ "extract_structure" ] }, { "page": "header_to_axes", 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