Package: fmrilatent
Type: Package
Title: Latent Space Representations of fMRI Data
Version: 0.2.1
Authors@R: 
    person(given = "Bradley",
           family = "Buchsbaum",
           role = c("aut", "cre"),
           email = "brad.buchsbaum@gmail.com",
           comment = c(ORCID = "0000-0002-1108-4866"))
Maintainer: Bradley Buchsbaum <brad.buchsbaum@gmail.com>
Description: Provides S4 classes and methods for representing
        neuroimaging data in latent spaces. The LatentNeuroVec class
        offers a memory-efficient representation using matrix
        factorization (basis x loadings plus a per-voxel offset),
        enabling compact storage and efficient computation for PCA,
        temporal bases, graph and wavelet dictionaries, Slepian bases,
        HRBF atoms, and related fMRI decompositions. Integrates with
        the neuroim2 package for standard neuroimaging data structures.
License: GPL (>= 3)
URL: https://github.com/bbuchsbaum/fmrilatent
BugReports: https://github.com/bbuchsbaum/fmrilatent/issues
Additional_repositories: https://bbuchsbaum.r-universe.dev
Encoding: UTF-8
RoxygenNote: 7.3.3
Imports: cli, crayon, graphics, Matrix, methods, digest, neuroim2 (>=
        0.19.0), rlang, stats, utils, Rcpp
Suggests: albersdown, knitr, rmarkdown, testthat (>= 3.0.0), RSpectra,
        neuroatlas, neurosurf, rgsp, bench, ggplot2
Remotes: bbuchsbaum/neuroim2, bbuchsbaum/neuroatlas,
        bbuchsbaum/neurosurf, rgsp=bbuchsbaum/graphsp
VignetteBuilder: knitr
Config/testthat/edition: 3
LinkingTo: Rcpp, RcppEigen
SystemRequirements: OpenMP (optional)
Collate: 'RcppExports.R' 'latent_utils.R' 'latent_handles.R'
        'all_class.R' 'all_generic.R' 'encode.R' 'reduction.R'
        'heat_wavelet.R' 'awpt.R' 'benchmark_roundtrip.R'
        'bspline_basis.R' 'codec_boldzip.R' 'codec_boldzip_decompose.R'
        'codec_boldzip_diagnostics.R' 'codec_boldzip_quantize.R'
        'codec_boldzip_spatial.R' 'codec_boldzip_validate.R'
        'compat_profile.R' 'encoder_utilities.R' 'cpp_boundary.R'
        'dct_basis.R' 'diffusion_wavelet.R'
        'diffusion_wavelet_handle.R' 'encode_methods_hierarchical.R'
        'encode_methods_space.R' 'encode_methods_st.R'
        'encode_methods_time.R' 'encode_operator.R'
        'encoder_validators.R' 'encode_spec.R' 'encode_template.R'
        'encode_transport_solve.R' 'encoder_registry.R'
        'fmrilatent-package.R' 'graph_bridge.R' 'haar_wavelet.R'
        'heat_wavelet_handle.R' 'hierarchical_helpers.R'
        'hierarchical_template.R' 'hrbf.R' 'implicit_latent.R'
        'latent_shared_validation.R' 'slepian_handles.R'
        'latent_neurovec_materialize.R' 'latent_surface_vector.R'
        'latent_bilateral_surface_vector.R' 'transport_latent.R'
        'latent_block_vector.R' 'latent_dct_heatwavelet.R'
        'latent_neurovector.R' 'latent_indexing.R' 'latent_methods.R'
        'latent_units.R' 'parcel_basis.R' 'pca_spatial.R'
        'searchlight_utils.R' 'shared_structure.R' 'slepian_plot.R'
        'slepian_spatial.R' 'slepian_spatiotemporal.R'
        'slepian_temporal.R' 'spatial_plot.R' 'surface_template.R'
        'wavelet_active.R' 'zzz.R'
Config/Needs/website: albersdown
Config/pak/sysreqs: cmake libicu-dev
Repository: https://bbuchsbaum.r-universe.dev
Date/Publication: 2026-08-25 09:12:49 UTC
RemoteUrl: https://github.com/bbuchsbaum/fmrilatent
RemoteRef: HEAD
RemoteSha: ceaad61acea6fd6326d6978a0aad23090ec28b18
NeedsCompilation: yes
Packaged: 2026-10-03 18:33:20 UTC; root
Author: Bradley Buchsbaum [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-1108-4866>)