Package: neuroim2
Type: Package
Title: Data Structures for Brain Imaging Data
Version: 0.19.1.9000
LinkingTo: Rcpp, RcppArmadillo, RcppParallel
Author: Bradley R Buchsbaum [aut, cre, cph]
Authors@R: c(
    person(c("Bradley", "R"), "Buchsbaum", role = c("aut", "cre", "cph"), email = "brad.buchsbaum@gmail.com"))
Maintainer: Bradley R Buchsbaum <brad.buchsbaum@gmail.com>
Description: A collection of data structures and methods for handling
        volumetric brain imaging data, with a focus on functional
        magnetic resonance imaging (fMRI). Provides efficient
        representations for three-dimensional and four-dimensional
        neuroimaging data through sparse and dense array
        implementations, memory-mapped file access for large datasets,
        and spatial transformation capabilities. Implements methods for
        image resampling, spatial filtering, region of interest
        analysis, and connected component labeling. General
        introduction to fMRI analysis can be found in Poldrack et al.
        (2024, "Handbook of functional MRI data analysis",
        <ISBN:9781108795760>).
License: MIT + file LICENSE
Encoding: UTF-8
VignetteBuilder: knitr, rmarkdown
Depends: R (>= 4.3.0), Matrix
Collate: 'RcppExports.R' 'all_generic.R' 'all_class.R'
        'SparseNeuroVec-validity.R' 'affine_utils.R' 'afni_io.R'
        'array_like.R' 'as_raster.R' 'axis.R' 'big_neurovec.R'
        'binary_io.R' 'cgb.R' 'cgb_nuisance.R' 'clustered_neurovec.R'
        'clustervol.R' 'common.R' 'conncomp.R' 'deoblique.R'
        'downsample.R' 'file_format.R' 'filebacked_neurovec.R'
        'globals.R' 'header_api.R' 'index_vol.R' 'mapped_neurovec.R'
        'meta_info.R' 'meta_info_api.R' 'neuro_obj.R' 'neurohypervec.R'
        'neuroim.R' 'neuroslice.R' 'neurospace.R' 'neurovec.R'
        'neurovecseq.R' 'neurovol.R' 'nifti_extensions.R' 'nifti_io.R'
        'niml_io.R' 'ops.R' 'orientation.R' 'palettes.R'
        'plot-checkerboard.R' 'plot-edge-overlay.R' 'plot-engine.R'
        'plot-helpers.R' 'plot-montage.R' 'plot-ortho.R'
        'plot-overlay.R' 'read_image.R' 'resample.R' 'resample_to.R'
        'roi.R' 'searchlight.R' 'show_helpers.R' 'simulate.R'
        'space_utils.R' 'sparse_neurovec.R' 'spat_filter.R'
        'summary_methods.R' 'theme.R' 'zzz.R'
RoxygenNote: 7.3.3
Imports: purrr, mmap, Rcpp, RcppParallel, RNifti, dbscan, stringr,
        methods, bigstatsr, RNiftyReg, future, future.apply, deflist,
        cli, ggplot2, magrittr, grid, patchwork
Suggests: testthat, covr, knitr, pkgdown, ragg, roxygen2, rmarkdown,
        albersdown, Gmedian, R.utils, spelling, systemfonts, vdiffr,
        xml2
URL: https://github.com/bbuchsbaum/neuroim2,
        https://bbuchsbaum.github.io/neuroim2/
BugReports: https://github.com/bbuchsbaum/neuroim2/issues
Language: en-US
Config/Needs/website: bbuchsbaum/albersdown
Config/pak/sysreqs: cmake libicu-dev
Repository: https://bbuchsbaum.r-universe.dev
Date/Publication: 2026-10-16 15:42:46 UTC
RemoteUrl: https://github.com/bbuchsbaum/neuroim2
RemoteRef: HEAD
RemoteSha: 9665fcccbd375e0cb02fd0048cfb81c02981c5c8
NeedsCompilation: yes
Packaged: 2026-10-16 17:39:37 UTC; root