Package: niflowr
Title: Spec-Driven Neuroimaging Command-Line Tool Wrappers
Version: 0.1.0
Authors@R: person("Bradley", "Buchsbaum", email = "brad.buchsbaum@gmail.com",
    role = c("aut", "cre"))
Description: A lightweight, declarative framework for wrapping
        neuroimaging command-line tools (FSL, AFNI, ANTs, FreeSurfer)
        in R. Tool interfaces are defined as JSON specifications that
        describe inputs, outputs, CLI rendering rules, and validation
        constraints. The package builds safe argument vectors (never
        shell strings), executes via 'processx', captures provenance,
        and integrates with 'targets' for pipeline orchestration.
License: MIT + file LICENSE
URL: https://bbuchsbaum.github.io/niflowr/,
        https://github.com/bbuchsbaum/niflowr
BugReports: https://github.com/bbuchsbaum/niflowr/issues
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Imports: cli, digest, fs, glue, jsonlite, jsonvalidate, processx, yaml,
        utils
Suggests: bidsappr, bidser, crew, fmriprepper, knitr, neuroim2,
        neurotransform, openneuroR, rmarkdown, targets, tarchetypes,
        tibble, testthat (>= 3.0.0), withr
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/Needs/website: albersdown
Config/pak/sysreqs: cmake make libuv1-dev libssl-dev libnode-dev
Repository: https://bbuchsbaum.r-universe.dev
Date/Publication: 2026-06-19 02:38:20 UTC
RemoteUrl: https://github.com/bbuchsbaum/niflowr
RemoteRef: HEAD
RemoteSha: f600660bc3456508f9bfac395de56315c76e5bbc
NeedsCompilation: no
Packaged: 2026-07-19 05:19:57 UTC; root
Author: Bradley Buchsbaum [aut, cre]
Maintainer: Bradley Buchsbaum <brad.buchsbaum@gmail.com>