Prerequisites | Reading the fluent $ syntax | Step 1: Download an OpenNeuro dataset | Step 2: Build an fMRIPrep plan | Step 3: Validate and run | Tips
Package: openneuroR 0.1.0
openneuroR: Programmatic Access to OpenNeuro Datasets
Search, explore, and download datasets from 'OpenNeuro' <https://openneuro.org>, the largest open neuroimaging data repository. Queries the 'OpenNeuro' GraphQL API to discover datasets by modality, diagnosis, or keyword; inspect snapshots, files, and subject lists; and download full datasets or selected subsets via HTTPS, Amazon S3, or 'DataLad'. Downloaded data are cached locally so subsequent requests skip already-fetched files.
Authors:
openneuroR_0.1.0.tar.gz
openneuroR_0.1.0.zip(r-4.7)openneuroR_0.1.0.zip(r-4.6)openneuroR_0.1.0.zip(r-4.5)
openneuroR_0.1.0.tgz(r-4.6-any)openneuroR_0.1.0.tgz(r-4.5-any)
openneuroR_0.1.0.tar.gz(r-4.7-any)openneuroR_0.1.0.tar.gz(r-4.6-any)
openneuroR_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
openneuroR/json (API)
| # Install 'openneuroR' in R: |
| install.packages('openneuroR', repos = c('https://bbuchsbaum.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/bbuchsbaum/openneuror/issues
Pkgdown/docs site:https://bbuchsbaum.github.io
Last updated from:11fdbfd5e6. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 168 | ||
| source / vignettes | OK | 185 | ||
| linux-release-x86_64 | OK | 165 | ||
| macos-release-arm64 | OK | 113 | ||
| macos-oldrel-arm64 | OK | 87 | ||
| windows-devel | OK | 96 | ||
| windows-release | OK | 111 | ||
| windows-oldrel | OK | 94 | ||
| wasm-release | OK | 117 |
Exports:on_bidson_cache_clearon_cache_infoon_cache_liston_clienton_dataseton_derivativeson_doctoron_downloadon_download_derivativeson_fetchon_fileson_handleon_pathon_requeston_searchon_snapshotson_spaceson_subjectsregex
Dependencies:askpassclicurldplyrfsgenericsgluehttr2jsonlitelifecyclemagrittropensslpillarpkgconfigprocessxpsR6rappdirsrlangsystibbletidyselectutf8vctrswithr
End-to-End: OpenNeuro Download + fmriprepper Run
Last update: 2026-06-26
Started: 2026-03-30
Getting Started with openneuro
Why openneuro? | Load the package | Find datasets | Inspect versions and files | Download data | Manage the cache | Discover derivatives | Next steps
Last update: 2026-06-26
Started: 2026-03-30
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Create BIDS Project from OpenNeuro Handle | on_bids |
| Clear Cache | on_cache_clear |
| Get Cache Information | on_cache_info |
| List Cached Datasets | on_cache_list |
| Create OpenNeuro API Client | on_client |
| Get Dataset Metadata | on_dataset |
| Discover Derivative Datasets | on_derivatives |
| OpenNeuro Backend Diagnostics | on_doctor |
| Download OpenNeuro Dataset | on_download |
| Download Derivative Dataset | on_download_derivatives |
| Fetch Handle (Materialize Download) | on_fetch on_fetch.openneuro_handle |
| List Files in a Snapshot | on_files |
| Create Lazy Handle to OpenNeuro Dataset | on_handle |
| Get Path from Handle | on_path on_path.openneuro_handle |
| Execute GraphQL Query | on_request |
| Search OpenNeuro Datasets | on_search |
| List Dataset Snapshots | on_snapshots |
| Discover Available Output Spaces | on_spaces |
| List Subjects in a Dataset | on_subjects |
| Print Method for OpenNeuro Doctor | print.openneuro_doctor |
| Print Method for OpenNeuro Handle | print.openneuro_handle |
| Mark String as Regex Pattern for Subject Filtering | regex |
